Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RPYSC3_RS10310 | Not Available | Positive | 2232807 - 2233667 | 31116.7 |
| abc transporter permease | RPYSC3_RS10315 | Not Available | Positive | 2233894 - 2234688 | 28952.2 |
| abc transporter substrate-binding protein | RPYSC3_RS10320 | Not Available | Positive | 2234747 - 2235769 | 35199.4 |
| hypothetical protein | RPYSC3_RS10325 | Not Available | Positive | 2235777 - 2236493 | 27144.2 |
| biotin synthase biob | RPYSC3_RS10330 | Not Available | Negative | 2236552 - 2237562 | 36461.7 |
| hypothetical protein | RPYSC3_RS24950 | Not Available | Positive | 2237832 - 2237981 | 4739.91 |
| 2-isopropylmalate synthase | RPYSC3_RS10335 | Not Available | Positive | 2238078 - 2239652 | 57510.4 |
| trap transporter substrate-binding protein | RPYSC3_RS10340 | Not Available | Positive | 2239876 - 2240880 | 36481.2 |
| trap transporter small permease | RPYSC3_RS10345 | Not Available | Positive | 2241019 - 2241603 | 21904.3 |
| trap transporter large permease | RPYSC3_RS10350 | Not Available | Positive | 2241600 - 2242925 | 47178.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
