Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine(20/20a) synthase dusa | RPYSC3_RS09965 | Not Available | Positive | 2157895 - 2158887 | 36119.7 |
| helix-turn-helix domain-containing protein | RPYSC3_RS09970 | Not Available | Negative | 2158916 - 2159242 | 12149.0 |
| tigr02281 family clan aa aspartic protease | RPYSC3_RS09975 | Not Available | Negative | 2159376 - 2159912 | 18653.9 |
| duf1289 domain-containing protein | RPYSC3_RS09980 | Not Available | Negative | 2159935 - 2160159 | 8107.01 |
| sensor histidine kinase | RPYSC3_RS09985 | Not Available | Negative | 2160204 - 2161799 | 57650.0 |
| nad(p)-dependent oxidoreductase | RPYSC3_RS09990 | Not Available | Negative | 2161968 - 2162837 | 30340.3 |
| mrp/nbp35 family atp-binding protein | RPYSC3_RS09995 | Not Available | Positive | 2163133 - 2164245 | 38612.9 |
| trap transporter substrate-binding protein | RPYSC3_RS10000 | Not Available | Positive | 2164496 - 2165587 | 40028.6 |
| trap transporter large permease subunit | RPYSC3_RS10005 | Not Available | Negative | 2165787 - 2167628 | 66099.4 |
| trap transporter small permease subunit | RPYSC3_RS10010 | Not Available | Negative | 2167666 - 2168262 | 22151.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
