Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | RPYSC3_RS09865 | Not Available | Positive | 2132523 - 2132831 | 11308.6 |
| pyrroloquinoline quinone biosynthesis protein pqqe | RPYSC3_RS09870 | Not Available | Positive | 2132828 - 2134006 | 42319.5 |
| hlyd family secretion protein | RPYSC3_RS09875 | Not Available | Negative | 2134193 - 2135068 | 31814.3 |
| duf1656 domain-containing protein | RPYSC3_RS09880 | Not Available | Negative | 2135080 - 2135289 | 7724.81 |
| fusc family protein | RPYSC3_RS09885 | Not Available | Negative | 2135289 - 2137301 | 71863.0 |
| tetr/acrr family transcriptional regulator | RPYSC3_RS09890 | Not Available | Positive | 2137464 - 2138144 | 24955.5 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | RPYSC3_RS09895 | Not Available | Negative | 2138405 - 2139514 | 39605.8 |
| atp-binding protein | RPYSC3_RS09900 | Not Available | Negative | 2139613 - 2141136 | 55324.5 |
| llm class flavin-dependent oxidoreductase | RPYSC3_RS09905 | Not Available | Negative | 2141263 - 2142282 | 37432.2 |
| tetr/acrr family transcriptional regulator | RPYSC3_RS09910 | Not Available | Negative | 2142395 - 2143018 | 23291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
