Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS25245 | Not Available | Positive | 2105784 - 2106047 | 10203.9 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS09770 | Not Available | Positive | 2106102 - 2106953 | 29424.9 |
| sensor histidine kinase | RPYSC3_RS09775 | Not Available | Positive | 2107182 - 2108630 | 52107.5 |
| bifunctional | RPYSC3_RS09780 | Not Available | Positive | 2108627 - 2111599 | 109404.0 |
| is630 family transposase | RPYSC3_RS09785 | Not Available | Negative | 2111606 - 2112554 | 35542.1 |
| hypothetical protein | RPYSC3_RS09790 | Not Available | Negative | 2112706 - 2112957 | 8673.34 |
| helix-turn-helix domain-containing protein | RPYSC3_RS09795 | Not Available | Negative | 2113058 - 2114080 | 37119.7 |
| autotransporter domain-containing protein | RPYSC3_RS09800 | Not Available | Positive | 2114546 - 2117944 | 117033.0 |
| pas domain-containing sensor histidine kinase | RPYSC3_RS09805 | Not Available | Negative | 2118327 - 2120636 | 84544.4 |
| cation-efflux pump | RPYSC3_RS09810 | Not Available | Negative | 2120854 - 2122233 | 49369.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
