Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | RPYSC3_RS09715 | Not Available | Positive | 2095712 - 2096215 | 17895.6 |
| heme lyase ccmf/nrfe family subunit | RPYSC3_RS09720 | Not Available | Positive | 2096212 - 2098194 | 71041.9 |
| helix-turn-helix transcriptional regulator | RPYSC3_RS09725 | Not Available | Negative | 2098196 - 2098636 | 16060.2 |
| type ii toxin-antitoxin system rele family toxin | RPYSC3_RS09730 | Not Available | Negative | 2098682 - 2098924 | 9149.17 |
| cytochrome c-type biogenesis protein | RPYSC3_RS09735 | Not Available | Positive | 2099061 - 2099525 | 17118.8 |
| formamidase | RPYSC3_RS09740 | Not Available | Negative | 2099645 - 2100667 | 38159.4 |
| ferritin-like domain-containing protein | RPYSC3_RS09750 | Not Available | Negative | 2101073 - 2101561 | 18173.5 |
| ferritin family protein | RPYSC3_RS09755 | Not Available | Negative | 2101615 - 2102523 | 33073.0 |
| do family serine endopeptidase | RPYSC3_RS09760 | Not Available | Positive | 2102892 - 2104463 | 53827.1 |
| response regulator transcription factor | RPYSC3_RS09765 | Not Available | Positive | 2104741 - 2105421 | 25530.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
