Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | RPYSC3_RS09665 | Not Available | Positive | 2082568 - 2083113 | 19948.8 |
| glycoside hydrolase/phage tail family protein | RPYSC3_RS09670 | Not Available | Positive | 2083234 - 2087106 | 136085.0 |
| duf2793 domain-containing protein | RPYSC3_RS09675 | Not Available | Positive | 2087116 - 2088483 | 47270.8 |
| glycoside hydrolase family 19 protein | RPYSC3_RS09680 | Not Available | Positive | 2088614 - 2089372 | 27146.4 |
| 3tm-type holin | RPYSC3_RS09685 | Not Available | Positive | 2089375 - 2089947 | 20043.2 |
| response regulator transcription factor | RPYSC3_RS09690 | Not Available | Positive | 2090059 - 2090733 | 24991.8 |
| sensor histidine kinase | RPYSC3_RS09695 | Not Available | Positive | 2090749 - 2092140 | 50502.9 |
| rt0821/lpp0805 family surface protein | RPYSC3_RS09700 | Not Available | Positive | 2092237 - 2092701 | 15806.7 |
| hypothetical protein | RPYSC3_RS09705 | Not Available | Positive | 2092926 - 2094329 | 51986.4 |
| c-type cytochrome biogenesis protein ccmi | RPYSC3_RS09710 | Not Available | Positive | 2094492 - 2095598 | 39202.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
