Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase domain-containing protein | RPYSC3_RS09400 | Not Available | Negative | 2031063 - 2033336 | 82488.0 |
| ycgn family cysteine cluster protein | RPYSC3_RS09405 | Not Available | Positive | 2033607 - 2034119 | 19472.2 |
| sulfite exporter taue/safe family protein | RPYSC3_RS09410 | Not Available | Positive | 2034173 - 2034916 | 25558.2 |
| marr family winged helix-turn-helix transcriptional regulator | RPYSC3_RS09415 | Not Available | Negative | 2035213 - 2035728 | 18579.4 |
| cytochrome p450 | RPYSC3_RS09420 | Not Available | Positive | 2035808 - 2037046 | 44661.2 |
| 2fe-2s iron-sulfur cluster-binding protein | RPYSC3_RS09425 | Not Available | Positive | 2037056 - 2037376 | 11206.3 |
| abc transporter substrate-binding protein | RPYSC3_RS09430 | Not Available | Positive | 2037457 - 2038671 | 42940.2 |
| hypothetical protein | RPYSC3_RS09435 | Not Available | Negative | 2039110 - 2039316 | 7295.01 |
| pepsy-associated tm helix domain-containing protein | RPYSC3_RS09440 | Not Available | Negative | 2039313 - 2040476 | 42985.3 |
| tonb-dependent siderophore receptor | RPYSC3_RS09445 | Not Available | Negative | 2040473 - 2042788 | 83699.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
