Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | RPYSC3_RS00845 | Not Available | Negative | 180794 - 181153 | 13276.8 |
| type ii toxin-antitoxin system pard family antitoxin | RPYSC3_RS00850 | Not Available | Negative | 181143 - 181400 | 9519.16 |
| glutamate-5-semialdehyde dehydrogenase | RPYSC3_RS00855 | Not Available | Positive | 181523 - 182815 | 45099.9 |
| nicotinate-nucleotide adenylyltransferase | RPYSC3_RS00860 | Not Available | Positive | 182840 - 183469 | 23255.3 |
| ribosome silencing factor | RPYSC3_RS00865 | Not Available | Positive | 183759 - 184136 | 13682.5 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | RPYSC3_RS00870 | Not Available | Positive | 184226 - 184708 | 17641.5 |
| murein hydrolase activator envc family protein | RPYSC3_RS00875 | Not Available | Positive | 184728 - 186119 | 48893.6 |
| s41 family peptidase | RPYSC3_RS00880 | Not Available | Positive | 186116 - 187492 | 48867.3 |
| divergent polysaccharide deacetylase family protein | RPYSC3_RS00885 | Not Available | Positive | 187644 - 188885 | 43650.3 |
| rna pyrophosphohydrolase | RPYSC3_RS00890 | Not Available | Positive | 188924 - 189430 | 19336.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
