Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding domain-containing protein | RPYSC3_RS09350 | Not Available | Positive | 2023358 - 2024158 | 28087.6 |
| duf1491 family protein | RPYSC3_RS09355 | Not Available | Positive | 2024301 - 2024642 | 12709.1 |
| duf2336 domain-containing protein | RPYSC3_RS09360 | Not Available | Negative | 2024771 - 2025745 | 35786.8 |
| polysaccharide deacetylase family protein | RPYSC3_RS09365 | Not Available | Negative | 2025897 - 2026970 | 37691.2 |
| hypothetical protein | RPYSC3_RS09370 | Not Available | Negative | 2027050 - 2027580 | 19216.1 |
| hypothetical protein | RPYSC3_RS09375 | Not Available | Positive | 2027760 - 2027960 | 7031.35 |
| hypothetical protein | RPYSC3_RS09380 | Not Available | Positive | 2027978 - 2028760 | 29029.8 |
| oxygenase mpab family protein | RPYSC3_RS09385 | Not Available | Positive | 2028913 - 2029794 | 33467.1 |
| duf1254 domain-containing protein | RPYSC3_RS09390 | Not Available | Negative | 2029875 - 2030444 | 20152.7 |
| duf1214 domain-containing protein | RPYSC3_RS09395 | Not Available | Negative | 2030441 - 2031019 | 20564.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
