Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | RPYSC3_RS09300 | Not Available | Negative | 2012956 - 2014953 | 71451.2 |
| class ii aldolase/adducin family protein | RPYSC3_RS09305 | Not Available | Negative | 2015418 - 2016200 | 29351.0 |
| hypothetical protein | RPYSC3_RS09310 | Not Available | Positive | 2016466 - 2017335 | 30731.5 |
| mucr family transcriptional regulator | RPYSC3_RS09315 | Not Available | Positive | 2017522 - 2017938 | 15466.7 |
| 3-oxoacyl-acp reductase family protein | RPYSC3_RS09320 | Not Available | Negative | 2017946 - 2018686 | 24968.9 |
| tetr/acrr family transcriptional regulator | RPYSC3_RS09325 | Not Available | Positive | 2018768 - 2019400 | 22588.6 |
| duf6456 domain-containing protein | RPYSC3_RS09330 | Not Available | Positive | 2019523 - 2020134 | 22236.6 |
| sufe family protein | RPYSC3_RS09335 | Not Available | Negative | 2020163 - 2020591 | 15958.0 |
| duf5330 domain-containing protein | RPYSC3_RS09340 | Not Available | Negative | 2020707 - 2021129 | 14840.6 |
| pas domain-containing sensor histidine kinase | RPYSC3_RS09345 | Not Available | Positive | 2021536 - 2023365 | 65204.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
