Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl co-a mutase-associated gtpase meab | RPYSC3_RS09200 | Not Available | Negative | 1992918 - 1993907 | 34996.1 |
| beta-class carbonic anhydrase | RPYSC3_RS09205 | Not Available | Negative | 1993994 - 1994587 | 21333.0 |
| duf3298 and duf4163 domain-containing protein | RPYSC3_RS09210 | Not Available | Negative | 1994790 - 1995575 | 28604.9 |
| type ii toxin-antitoxin system vapc family toxin | RPYSC3_RS09215 | Not Available | Negative | 1995660 - 1996061 | 15062.0 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | RPYSC3_RS09220 | Not Available | Negative | 1996067 - 1996324 | 9611.54 |
| methylmalonyl-coa mutase | RPYSC3_RS09225 | Not Available | Negative | 1996390 - 1998549 | 78058.4 |
| gfa family protein | RPYSC3_RS09230 | Not Available | Negative | 1998612 - 1999076 | 16678.7 |
| methylmalonyl-coa mutase subunit beta | RPYSC3_RS09235 | Not Available | Negative | 1999073 - 2000944 | 65265.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | RPYSC3_RS09240 | Not Available | Negative | 2001102 - 2001593 | 18067.7 |
| dihydroneopterin aldolase | RPYSC3_RS09245 | Not Available | Negative | 2001595 - 2001960 | 13239.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
