Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | RPYSC3_RS09100 | Not Available | Negative | 1970614 - 1971393 | 27806.9 |
| hypothetical protein | RPYSC3_RS09105 | Not Available | Negative | 1971479 - 1972204 | 24191.2 |
| sigma-70 family rna polymerase sigma factor | RPYSC3_RS09110 | Not Available | Positive | 1972458 - 1973003 | 19894.8 |
| nrsf family protein | RPYSC3_RS09115 | Not Available | Positive | 1973006 - 1973644 | 21925.6 |
| duf2946 family protein | RPYSC3_RS09120 | Not Available | Positive | 1973761 - 1974105 | 11752.4 |
| tonb-dependent receptor | RPYSC3_RS09125 | Not Available | Positive | 1974165 - 1976390 | 80496.4 |
| tonb-dependent receptor family protein | RPYSC3_RS09130 | Not Available | Positive | 1976423 - 1978642 | 80834.6 |
| duf2336 domain-containing protein | RPYSC3_RS09135 | Not Available | Negative | 1978662 - 1979771 | 40586.4 |
| ggdef domain-containing protein | RPYSC3_RS09140 | Not Available | Negative | 1979809 - 1980969 | 42832.2 |
| sigma-70 family rna polymerase sigma factor | RPYSC3_RS09145 | Not Available | Positive | 1981357 - 1981926 | 21418.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
