Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imua family protein | RPYSC3_RS09050 | Not Available | Positive | 1954081 - 1954866 | 28094.5 |
| y-family dna polymerase | RPYSC3_RS09055 | Not Available | Positive | 1954754 - 1956352 | 57175.5 |
| error-prone dna polymerase | RPYSC3_RS09060 | Not Available | Positive | 1956506 - 1960090 | 133913.0 |
| nad-dependent epimerase/dehydratase family protein | RPYSC3_RS09065 | Not Available | Negative | 1960095 - 1961048 | 33767.1 |
| lysr family transcriptional regulator | RPYSC3_RS09070 | Not Available | Positive | 1961129 - 1962079 | 34683.5 |
| coa transferase | RPYSC3_RS09075 | Not Available | Positive | 1962130 - 1963527 | 49393.8 |
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS09080 | Not Available | Positive | 1963746 - 1964984 | 44749.0 |
| efflux rnd transporter permease subunit | RPYSC3_RS09085 | Not Available | Positive | 1965144 - 1968266 | 112598.0 |
| hypothetical protein | RPYSC3_RS09090 | Not Available | Positive | 1968508 - 1968792 | 10094.6 |
| tolc family outer membrane protein | RPYSC3_RS09095 | Not Available | Negative | 1968997 - 1970415 | 49663.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
