Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | RPYSC3_RS09000 | Not Available | Positive | 1941768 - 1942286 | 18890.1 |
| hypothetical protein | RPYSC3_RS09005 | Not Available | Negative | 1942300 - 1942641 | 12131.6 |
| hypothetical protein | RPYSC3_RS09010 | Not Available | Negative | 1942657 - 1943706 | 37743.1 |
| cation:proton antiporter | RPYSC3_RS09015 | Not Available | Negative | 1943836 - 1945566 | 61848.0 |
| duf3124 domain-containing protein | RPYSC3_RS09020 | Not Available | Positive | 1945615 - 1946199 | 20494.8 |
| adenylate/guanylate cyclase domain-containing protein | RPYSC3_RS09025 | Not Available | Positive | 1946323 - 1947897 | 57947.4 |
| glycerate kinase | RPYSC3_RS09030 | Not Available | Negative | 1948020 - 1949300 | 43888.2 |
| abc transporter substrate-binding protein | RPYSC3_RS09035 | Not Available | Negative | 1949417 - 1950652 | 44306.9 |
| udgx family uracil-dna binding protein | RPYSC3_RS09040 | Not Available | Negative | 1950888 - 1952375 | 55615.6 |
| putative dna modification/repair radical sam protein | RPYSC3_RS09045 | Not Available | Negative | 1952663 - 1953913 | 46678.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
