Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | RPYSC3_RS08950 | Not Available | Positive | 1930335 - 1931639 | 45782.1 |
| duf3237 domain-containing protein | RPYSC3_RS08955 | Not Available | Positive | 1931701 - 1932162 | 17076.7 |
| crotonase/enoyl-coa hydratase family protein | RPYSC3_RS08960 | Not Available | Positive | 1932450 - 1933256 | 28516.6 |
| feruloyl-coa synthase | RPYSC3_RS08965 | Not Available | Positive | 1933268 - 1935163 | 68179.1 |
| acyl-coa thioesterase | RPYSC3_RS08970 | Not Available | Positive | 1935301 - 1935720 | 15851.1 |
| abc transporter substrate-binding protein | RPYSC3_RS08975 | Not Available | Positive | 1935802 - 1936959 | 40840.3 |
| ggdef domain-containing protein | RPYSC3_RS08980 | Not Available | Positive | 1937276 - 1938130 | 30353.9 |
| abc transporter atp-binding protein | RPYSC3_RS08985 | Not Available | Negative | 1938068 - 1938787 | 25358.1 |
| abc transporter permease subunit | RPYSC3_RS08990 | Not Available | Negative | 1938784 - 1940556 | 62742.9 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS08995 | Not Available | Negative | 1940562 - 1941602 | 36185.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
