Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 173543 - 173632 | Not Available |
| rok family protein | RPYSC3_RS00805 | Not Available | Negative | 173786 - 174949 | 42470.2 |
| 50s ribosomal protein l21 | RPYSC3_RS00810 | Not Available | Positive | 175282 - 175662 | 13461.5 |
| 50s ribosomal protein l27 | RPYSC3_RS00815 | Not Available | Positive | 175752 - 176024 | 9581.55 |
| gnat family n-acetyltransferase | RPYSC3_RS00820 | Not Available | Positive | 176160 - 176759 | 22352.7 |
| hypothetical protein | RPYSC3_RS00825 | Not Available | Positive | 176971 - 177162 | 7181.47 |
| hypothetical protein | RPYSC3_RS25095 | Not Available | Positive | 177290 - 177463 | 6607.75 |
| dmt family transporter | RPYSC3_RS00830 | Not Available | Negative | 177464 - 178369 | 31863.9 |
| gtpase obge | RPYSC3_RS00835 | Not Available | Positive | 178522 - 179583 | 37745.1 |
| glutamate 5-kinase | RPYSC3_RS00840 | Not Available | Positive | 179725 - 180855 | 39574.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
