Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6537 domain-containing protein | RPYSC3_RS08600 | Not Available | Positive | 1850765 - 1851649 | 32994.6 |
| duf3307 domain-containing protein | RPYSC3_RS08605 | Not Available | Positive | 1851900 - 1852304 | 15240.1 |
| sensor domain-containing diguanylate cyclase | RPYSC3_RS08610 | Not Available | Positive | 1852588 - 1854786 | 80391.9 |
| hypothetical protein | RPYSC3_RS08615 | Not Available | Negative | 1854984 - 1855370 | 14230.8 |
| hypothetical protein | RPYSC3_RS08620 | Not Available | Positive | 1855620 - 1856027 | 14779.3 |
| ykgj family cysteine cluster protein | RPYSC3_RS08625 | Not Available | Negative | 1856034 - 1856366 | 11973.3 |
| pyridoxamine 5'-phosphate oxidase family protein | RPYSC3_RS08630 | Not Available | Negative | 1856429 - 1857049 | 22706.9 |
| lysr substrate-binding domain-containing protein | RPYSC3_RS08635 | Not Available | Positive | 1857151 - 1858068 | 32752.5 |
| dna oxidative demethylase alkb | RPYSC3_RS08640 | Not Available | Positive | 1858065 - 1858715 | 23406.0 |
| phenylacetate--coa ligase paak | RPYSC3_RS08645 | Not Available | Negative | 1858720 - 1860051 | 49310.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
