Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tobe domain-containing protein | RPYSC3_RS00750 | Not Available | Negative | 163884 - 164675 | 28569.4 |
| duf2478 domain-containing protein | RPYSC3_RS00755 | Not Available | Negative | 164790 - 165326 | 18824.9 |
| abc transporter atp-binding protein | RPYSC3_RS00760 | Not Available | Negative | 165350 - 166144 | 28097.3 |
| feccd family abc transporter permease | RPYSC3_RS00765 | Not Available | Negative | 166141 - 167163 | 35429.0 |
| iron abc transporter substrate-binding protein | RPYSC3_RS00770 | Not Available | Negative | 167165 - 168214 | 38232.6 |
| sam-dependent methyltransferase | RPYSC3_RS00775 | Not Available | Negative | 168211 - 168714 | 18522.0 |
| tonb-dependent receptor | RPYSC3_RS00780 | Not Available | Positive | 169272 - 171455 | 80968.4 |
| mota/tolq/exbb proton channel family protein | RPYSC3_RS00785 | Not Available | Positive | 171509 - 172147 | 21939.7 |
| exbd/tolr family protein | RPYSC3_RS00790 | Not Available | Positive | 172160 - 172627 | 16421.0 |
| energy transducer tonb | RPYSC3_RS00795 | Not Available | Positive | 172666 - 173430 | 27124.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
