Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftr1 family protein | RPYSC3_RS08200 | Not Available | Positive | 1758809 - 1759675 | 30814.8 |
| transglutaminase-like domain-containing protein | RPYSC3_RS08205 | Not Available | Negative | 1759666 - 1760415 | 27012.6 |
| duf3222 family protein | RPYSC3_RS08210 | Not Available | Negative | 1760405 - 1760632 | 8009.6 |
| hypothetical protein | RPYSC3_RS08215 | Not Available | Negative | 1760730 - 1760999 | 9995.78 |
| alpha/beta fold hydrolase | RPYSC3_RS08220 | Not Available | Negative | 1761077 - 1762078 | 35837.9 |
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS08225 | Not Available | Positive | 1762231 - 1763493 | 44704.9 |
| abc transporter permease | RPYSC3_RS08230 | Not Available | Positive | 1763490 - 1764716 | 43352.3 |
| abc transporter atp-binding protein | RPYSC3_RS08235 | Not Available | Positive | 1764709 - 1765389 | 24776.8 |
| abc transporter substrate-binding protein | RPYSC3_RS08240 | Not Available | Negative | 1765482 - 1766699 | 44242.0 |
| flagellar hook basal-body protein | RPYSC3_RS08245 | Not Available | Positive | 1767299 - 1768120 | 28148.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
