Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | RPYSC3_RS07900 | Not Available | Negative | 1698688 - 1699233 | 19293.7 |
| hypothetical protein | RPYSC3_RS07905 | Not Available | Negative | 1699214 - 1699468 | 9554.2 |
| acyltransferase | RPYSC3_RS07910 | Not Available | Negative | 1699520 - 1700296 | 28445.9 |
| cupin domain-containing protein | RPYSC3_RS07915 | Not Available | Negative | 1700296 - 1700691 | 13638.6 |
| glutamate racemase | RPYSC3_RS07920 | Not Available | Negative | 1700745 - 1701539 | 27949.1 |
| paai family thioesterase | RPYSC3_RS07925 | Not Available | Negative | 1701622 - 1702110 | 18069.5 |
| trpb-like pyridoxal phosphate-dependent enzyme | RPYSC3_RS07930 | Not Available | Positive | 1702265 - 1703629 | 49415.1 |
| phosphoribosylformylglycinamidine synthase subunit purl | RPYSC3_RS07935 | Not Available | Positive | 1703917 - 1706127 | 78499.3 |
| acyltransferase family protein | RPYSC3_RS07940 | Not Available | Negative | 1706491 - 1707672 | 44421.7 |
| duf427 domain-containing protein | RPYSC3_RS07945 | Not Available | Negative | 1707747 - 1708109 | 13283.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
