Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS07650 | Not Available | Positive | 1637539 - 1637811 | 9772.53 |
| c-type cytochrome | RPYSC3_RS07655 | Not Available | Negative | 1637938 - 1638357 | 14695.8 |
| transcriptional regulator ppsr | RPYSC3_RS07660 | Not Available | Positive | 1638679 - 1640241 | 57206.8 |
| gaf domain-containing protein | RPYSC3_RS07665 | Not Available | Positive | 1640139 - 1642265 | 77869.3 |
| heme oxygenase (biliverdin-producing) | RPYSC3_RS07670 | Not Available | Negative | 1642522 - 1643184 | 23529.9 |
| b12-binding domain-containing protein | RPYSC3_RS07675 | Not Available | Negative | 1643245 - 1643928 | 25064.0 |
| 2-vinyl bacteriochlorophyllide hydratase | RPYSC3_RS07680 | Not Available | Positive | 1644458 - 1644943 | 18044.3 |
| ferredoxin:protochlorophyllide reductase (atp-dependent) subunit n | RPYSC3_RS07685 | Not Available | Positive | 1644940 - 1646229 | 46816.6 |
| ferredoxin:protochlorophyllide reductase (atp-dependent) subunit b | RPYSC3_RS07690 | Not Available | Positive | 1646232 - 1647854 | 58522.1 |
| magnesium chelatase subunit h | RPYSC3_RS07695 | Not Available | Positive | 1647829 - 1651575 | 136047.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
