Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS07460 | Not Available | Positive | 1594209 - 1595408 | 42472.5 |
| multidrug efflux rnd transporter permease subunit | RPYSC3_RS07465 | Not Available | Positive | 1595419 - 1598586 | 113795.0 |
| hypothetical protein | RPYSC3_RS07470 | Not Available | Positive | 1598712 - 1599167 | 15274.0 |
| ferritin-like domain-containing protein | RPYSC3_RS07475 | Not Available | Negative | 1599425 - 1599874 | 16117.1 |
| coenzyme f420 hydrogenase/dehydrogenase, beta subunit c-terminal domain | RPYSC3_RS07480 | Not Available | Negative | 1599990 - 1601219 | 45870.9 |
| cia30 family protein | RPYSC3_RS07485 | Not Available | Negative | 1601280 - 1601768 | 18081.6 |
| alpha/beta hydrolase family protein | RPYSC3_RS07490 | Not Available | Negative | 1601768 - 1603372 | 57279.0 |
| duf3422 family protein | RPYSC3_RS07495 | Not Available | Negative | 1603372 - 1604685 | 47969.9 |
| hydroxymethylbilane synthase | RPYSC3_RS07500 | Not Available | Positive | 1604936 - 1605916 | 35518.0 |
| magnesium chelatase atpase subunit i | RPYSC3_RS07505 | Not Available | Positive | 1605922 - 1606944 | 37222.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
