Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | RPYSC3_RS07065 | Not Available | Positive | 1504639 - 1505649 | 35567.6 |
| efflux rnd transporter permease subunit | RPYSC3_RS07070 | Not Available | Negative | 1505675 - 1508833 | 113659.0 |
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS07075 | Not Available | Negative | 1508830 - 1510221 | 49834.4 |
| fixh family protein | RPYSC3_RS07080 | Not Available | Negative | 1510309 - 1510704 | 13741.7 |
| hypothetical protein | RPYSC3_RS07085 | Not Available | Negative | 1510801 - 1511208 | 13904.9 |
| family 2a encapsulin nanocompartment shell protein | RPYSC3_RS07090 | Not Available | Positive | 1511750 - 1512694 | 35119.9 |
| family 2a encapsulin nanocompartment cargo protein cysteine desulfurase | RPYSC3_RS07095 | Not Available | Positive | 1512681 - 1514657 | 69069.3 |
| serine o-acetyltransferase epsc | RPYSC3_RS07100 | Not Available | Positive | 1514822 - 1515769 | 34057.9 |
| methionine abc transporter atp-binding protein | RPYSC3_RS07105 | Not Available | Positive | 1515959 - 1517065 | 39470.8 |
| methionine abc transporter permease | RPYSC3_RS07110 | Not Available | Positive | 1517055 - 1517723 | 23266.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
