Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine exporter thre family protein | RPYSC3_RS06960 | Not Available | Positive | 1480177 - 1481457 | 42807.3 |
| cupin domain-containing protein | RPYSC3_RS06965 | Not Available | Positive | 1481454 - 1481855 | 14708.2 |
| malate dehydrogenase (quinone) | RPYSC3_RS06970 | Not Available | Positive | 1481852 - 1483345 | 54058.4 |
| is481 family transposase | RPYSC3_RS06980 | Not Available | Negative | 1483885 - 1485069 | 45287.6 |
| allophanate hydrolase | RPYSC3_RS06985 | Not Available | Negative | 1485317 - 1487137 | 62410.7 |
| urea carboxylase | RPYSC3_RS06990 | Not Available | Negative | 1487137 - 1490685 | 127529.0 |
| urea amidolyase associated protein uaap2 | RPYSC3_RS06995 | Not Available | Negative | 1490688 - 1491323 | 23008.3 |
| urea amidolyase associated protein uaap1 | RPYSC3_RS07000 | Not Available | Negative | 1491326 - 1492165 | 30388.8 |
| abc transporter atp-binding protein | RPYSC3_RS07005 | Not Available | Negative | 1492204 - 1492995 | 29447.6 |
| abc transporter permease | RPYSC3_RS07010 | Not Available | Negative | 1492992 - 1493810 | 29701.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
