Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubp-type zinc finger domain-containing protein | RPYSC3_RS06910 | Not Available | Positive | 1465930 - 1466238 | 11412.7 |
| helix-turn-helix transcriptional regulator | RPYSC3_RS06915 | Not Available | Positive | 1466422 - 1467261 | 30608.5 |
| sensor histidine kinase | RPYSC3_RS06920 | Not Available | Positive | 1467456 - 1468154 | 24754.9 |
| duf3551 domain-containing protein | RPYSC3_RS06925 | Not Available | Negative | 1468519 - 1468749 | 7833.43 |
| fusc family protein | RPYSC3_RS06930 | Not Available | Positive | 1469022 - 1471073 | 72409.3 |
| duf1656 domain-containing protein | RPYSC3_RS06935 | Not Available | Positive | 1471087 - 1471293 | 7523.61 |
| hlyd family secretion protein | RPYSC3_RS06940 | Not Available | Positive | 1471338 - 1472231 | 31411.8 |
| helix-turn-helix domain-containing protein | RPYSC3_RS06945 | Not Available | Negative | 1472369 - 1473352 | 36502.1 |
| atp-binding protein | RPYSC3_RS06950 | Not Available | Positive | 1473452 - 1478587 | 185706.0 |
| class ii fumarate hydratase | RPYSC3_RS06955 | Not Available | Positive | 1478718 - 1480175 | 51692.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
