Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium channel family protein | RPYSC3_RS00600 | Not Available | Positive | 131301 - 132941 | 58804.2 |
| phosphodiesterase | RPYSC3_RS00605 | Not Available | Negative | 132948 - 133772 | 30661.7 |
| phosphodiesterase | RPYSC3_RS00610 | Not Available | Negative | 133769 - 134593 | 30742.5 |
| abc transporter substrate-binding protein | RPYSC3_RS00615 | Not Available | Negative | 134658 - 135938 | 46579.0 |
| carbohydrate abc transporter permease | RPYSC3_RS00620 | Not Available | Negative | 135968 - 136804 | 30519.2 |
| carbohydrate abc transporter permease | RPYSC3_RS00625 | Not Available | Negative | 136801 - 137760 | 34872.6 |
| abc transporter atp-binding protein | RPYSC3_RS00630 | Not Available | Negative | 137753 - 138907 | 41513.8 |
| lysr family transcriptional regulator | RPYSC3_RS00635 | Not Available | Positive | 139035 - 139913 | 31811.7 |
| abc transporter atp-binding protein | RPYSC3_RS00640 | Not Available | Negative | 139919 - 140614 | 24886.3 |
| abc transporter permease | RPYSC3_RS00645 | Not Available | Negative | 140611 - 141387 | 27321.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
