Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS06810 | Not Available | Positive | 1441723 - 1442055 | 11651.9 |
| hypothetical protein | RPYSC3_RS06815 | Not Available | Positive | 1442285 - 1442827 | 19904.4 |
| pas domain s-box protein | RPYSC3_RS06820 | Not Available | Positive | 1443275 - 1445134 | 66801.6 |
| response regulator transcription factor | RPYSC3_RS06825 | Not Available | Positive | 1445208 - 1445621 | 14832.5 |
| response regulator transcription factor | RPYSC3_RS06830 | Not Available | Positive | 1445618 - 1446304 | 25022.2 |
| dps family protein | RPYSC3_RS06835 | Not Available | Positive | 1446717 - 1447238 | 19769.3 |
| hded family acid-resistance protein | RPYSC3_RS06840 | Not Available | Positive | 1447252 - 1447857 | 20667.9 |
| sensor histidine kinase | RPYSC3_RS06845 | Not Available | Negative | 1447977 - 1448729 | 26971.5 |
| helix-turn-helix domain-containing protein | RPYSC3_RS06850 | Not Available | Negative | 1448965 - 1449870 | 33368.1 |
| rna polymerase factor sigma-32 | RPYSC3_RS06855 | Not Available | Negative | 1450001 - 1450981 | 36741.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
