Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | RPYSC3_RS06765 | Not Available | Positive | 1432417 - 1433235 | 29443.4 |
| flagellar hook capping flgd n-terminal domain-containing protein | RPYSC3_RS06770 | Not Available | Negative | 1433266 - 1433970 | 24855.8 |
| flagellar hook-length control protein flik | RPYSC3_RS06775 | Not Available | Negative | 1433983 - 1435608 | 54432.9 |
| trna 2-thiouridine(34) synthase mnma | RPYSC3_RS06780 | Not Available | Positive | 1435921 - 1437114 | 43199.3 |
| class i sam-dependent methyltransferase | RPYSC3_RS06785 | Not Available | Positive | 1437134 - 1437772 | 23508.5 |
| hypothetical protein | RPYSC3_RS06790 | Not Available | Positive | 1437818 - 1438156 | 10872.0 |
| Trna-met | Not Available | Not Available | Positive | 1438273 - 1438349 | Not Available |
| hypothetical protein | RPYSC3_RS06800 | Not Available | Negative | 1438441 - 1438620 | 6787.3 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS24940 | Not Available | Positive | 1439582 - 1440015 | 15859.1 |
| nadh:flavin oxidoreductase/nadh oxidase | RPYSC3_RS06805 | Not Available | Positive | 1440323 - 1441432 | 40148.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
