Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5131 family protein | RPYSC3_RS06715 | Not Available | Negative | 1421209 - 1421967 | 28317.0 |
| sensor histidine kinase | RPYSC3_RS06720 | Not Available | Positive | 1422328 - 1423341 | 36577.7 |
| sensor domain-containing diguanylate cyclase | RPYSC3_RS06725 | Not Available | Positive | 1423569 - 1425332 | 64539.5 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS06730 | Not Available | Negative | 1425373 - 1426188 | 28842.6 |
| beta-ketoacyl-acp synthase iii | RPYSC3_RS06735 | Not Available | Negative | 1426378 - 1427493 | 40227.0 |
| cupin | RPYSC3_RS06740 | Not Available | Positive | 1427793 - 1428140 | 12575.8 |
| restriction endonuclease | RPYSC3_RS06745 | Not Available | Positive | 1428325 - 1429278 | 34574.7 |
| arnt family glycosyltransferase | RPYSC3_RS06750 | Not Available | Positive | 1429517 - 1430968 | 51681.0 |
| type 1 glutamine amidotransferase domain-containing protein | RPYSC3_RS06755 | Not Available | Positive | 1431061 - 1431624 | 20398.4 |
| hypothetical protein | RPYSC3_RS06760 | Not Available | Negative | 1431819 - 1432190 | 12751.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
