Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS06665 | Not Available | Negative | 1412806 - 1413048 | 8650.17 |
| dna primase | RPYSC3_RS06670 | Not Available | Positive | 1413517 - 1415538 | 73388.5 |
| rna polymerase sigma factor rpod | RPYSC3_RS06675 | Not Available | Positive | 1415798 - 1417894 | 78736.6 |
| duf1902 domain-containing protein | RPYSC3_RS06680 | Not Available | Positive | 1417900 - 1418244 | 12052.3 |
| type ii toxin-antitoxin system hica family toxin | RPYSC3_RS06685 | Not Available | Positive | 1418244 - 1418441 | 7190.7 |
| higa family addiction module antitoxin | RPYSC3_RS06690 | Not Available | Negative | 1418549 - 1418872 | 11858.6 |
| type ii toxin-antitoxin system rele/pare family toxin | RPYSC3_RS06695 | Not Available | Negative | 1418883 - 1419173 | 11396.6 |
| hypothetical protein | RPYSC3_RS06700 | Not Available | Positive | 1419505 - 1419750 | 9460.37 |
| hypothetical protein | RPYSC3_RS06705 | Not Available | Positive | 1419750 - 1419956 | 8035.45 |
| three-cys-motif partner protein tcmp | RPYSC3_RS06710 | Not Available | Positive | 1420317 - 1421258 | 36173.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
