Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS06475 | Not Available | Positive | 1371294 - 1372007 | 25016.5 |
| hypothetical protein | RPYSC3_RS24935 | Not Available | Positive | 1372013 - 1372171 | 5890.56 |
| yihy/virulence factor brkb family protein | RPYSC3_RS06480 | Not Available | Positive | 1372315 - 1373166 | 29688.3 |
| response regulator transcription factor | RPYSC3_RS06485 | Not Available | Negative | 1373163 - 1374089 | 33718.0 |
| atp-binding protein | RPYSC3_RS06490 | Not Available | Negative | 1374079 - 1377447 | 123564.0 |
| urea abc transporter substrate-binding protein | RPYSC3_RS06495 | Not Available | Positive | 1377704 - 1378966 | 46079.2 |
| urea abc transporter permease subunit urtb | RPYSC3_RS06500 | Not Available | Positive | 1379137 - 1380063 | 33412.8 |
| urea abc transporter permease subunit urtc | RPYSC3_RS06505 | Not Available | Positive | 1380078 - 1381229 | 41643.0 |
| urea abc transporter atp-binding protein urtd | RPYSC3_RS06510 | Not Available | Positive | 1381240 - 1381995 | 27798.7 |
| urea abc transporter atp-binding subunit urte | RPYSC3_RS06515 | Not Available | Positive | 1382143 - 1382832 | 24797.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
