Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | RPYSC3_RS00550 | Not Available | Negative | 120193 - 121704 | 52967.4 |
| nuclear transport factor 2 family protein | RPYSC3_RS00555 | Not Available | Positive | 121916 - 122323 | 14718.3 |
| nad(p)/fad-dependent oxidoreductase | RPYSC3_RS00560 | Not Available | Positive | 122320 - 123714 | 51238.0 |
| hypothetical protein | RPYSC3_RS00565 | Not Available | Negative | 123842 - 124150 | 10841.4 |
| dtdp-glucose 4,6-dehydratase | RPYSC3_RS00570 | Not Available | Positive | 124536 - 125597 | 39347.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | RPYSC3_RS00575 | Not Available | Positive | 125623 - 126180 | 20401.1 |
| dtdp-4-dehydrorhamnose reductase | RPYSC3_RS00580 | Not Available | Positive | 126185 - 127078 | 31554.5 |
| glucose-1-phosphate thymidylyltransferase rfba | RPYSC3_RS00585 | Not Available | Positive | 127080 - 127955 | 32183.7 |
| hypothetical protein | RPYSC3_RS00590 | Not Available | Positive | 128048 - 128938 | 33839.4 |
| atp-binding protein | RPYSC3_RS00595 | Not Available | Positive | 129029 - 131308 | 82832.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
