Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:acceptor oxidoreductase subunit alpha | RPYSC3_RS06375 | Not Available | Positive | 1350843 - 1352006 | 41362.6 |
| thiamine pyrophosphate-dependent enzyme | RPYSC3_RS06380 | Not Available | Positive | 1352008 - 1352838 | 29857.9 |
| 2-oxoacid:acceptor oxidoreductase family protein | RPYSC3_RS06385 | Not Available | Positive | 1352853 - 1353413 | 19772.1 |
| phenylacetate--coa ligase family protein | RPYSC3_RS06390 | Not Available | Positive | 1353437 - 1354771 | 48670.7 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS06395 | Not Available | Positive | 1354983 - 1355855 | 30686.9 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS06400 | Not Available | Positive | 1355857 - 1357002 | 41041.2 |
| abc transporter atp-binding protein | RPYSC3_RS06405 | Not Available | Positive | 1356999 - 1357760 | 28119.9 |
| abc transporter atp-binding protein | RPYSC3_RS06410 | Not Available | Positive | 1357764 - 1358513 | 27466.7 |
| amp-binding protein | RPYSC3_RS06415 | Not Available | Positive | 1358497 - 1360197 | 60752.5 |
| abc transporter substrate-binding protein | RPYSC3_RS06420 | Not Available | Positive | 1360235 - 1361440 | 43336.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
