Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | RPYSC3_RS06225 | Not Available | Negative | 1314826 - 1315464 | 24163.5 |
| rt0821/lpp0805 family surface protein | RPYSC3_RS06230 | Not Available | Positive | 1315588 - 1315998 | 14533.0 |
| dnaj c-terminal domain-containing protein | RPYSC3_RS06235 | Not Available | Positive | 1316118 - 1317086 | 34112.4 |
| enoyl-acp reductase fabi | RPYSC3_RS06240 | Not Available | Positive | 1317485 - 1318306 | 29295.1 |
| histidine phosphatase family protein | RPYSC3_RS06245 | Not Available | Positive | 1318413 - 1319006 | 21600.5 |
| chorismate synthase | RPYSC3_RS06250 | Not Available | Positive | 1319110 - 1320198 | 38631.9 |
| adenylate/guanylate cyclase domain-containing protein | RPYSC3_RS06255 | Not Available | Positive | 1320304 - 1321503 | 43321.7 |
| atp-dependent clp protease adapter clps | RPYSC3_RS06260 | Not Available | Negative | 1321678 - 1321983 | 11410.9 |
| duf1194 domain-containing protein | RPYSC3_RS06265 | Not Available | Positive | 1322219 - 1323055 | 30037.1 |
| l-threonine dehydrogenase | RPYSC3_RS06270 | Not Available | Negative | 1323183 - 1324334 | 39575.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
