Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin converting factor subunit 1 | RPYSC3_RS06075 | Not Available | Negative | 1284368 - 1284619 | 9038.89 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | RPYSC3_RS06080 | Not Available | Negative | 1284616 - 1285242 | 22623.0 |
| excinuclease abc subunit uvrc | RPYSC3_RS06085 | Not Available | Negative | 1285382 - 1287484 | 76976.8 |
| outer membrane protein | RPYSC3_RS06090 | Not Available | Positive | 1287795 - 1288418 | 21970.7 |
| cold-shock protein | RPYSC3_RS06095 | Not Available | Negative | 1288844 - 1289059 | 7724.3 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | RPYSC3_RS06100 | Not Available | Negative | 1289333 - 1290190 | 31493.9 |
| response regulator | RPYSC3_RS06105 | Not Available | Positive | 1290483 - 1290878 | 14440.6 |
| thioesterase family protein | RPYSC3_RS06110 | Not Available | Negative | 1290963 - 1291358 | 14247.4 |
| tautomerase family protein | RPYSC3_RS06115 | Not Available | Negative | 1291368 - 1291571 | 7239.9 |
| histidine--trna ligase | RPYSC3_RS06120 | Not Available | Negative | 1291710 - 1293239 | 55706.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
