Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetraacyldisaccharide 4'-kinase | RPYSC3_RS06025 | Not Available | Positive | 1273550 - 1274572 | 35758.7 |
| duf2093 domain-containing protein | RPYSC3_RS06030 | Not Available | Negative | 1274582 - 1274809 | 8370.93 |
| exodeoxyribonuclease vii large subunit | RPYSC3_RS06035 | Not Available | Negative | 1274954 - 1276567 | 58241.2 |
| phosphoribosylamine--glycine ligase | RPYSC3_RS06040 | Not Available | Positive | 1276749 - 1278032 | 45011.3 |
| alpha/beta fold hydrolase | RPYSC3_RS06045 | Not Available | Positive | 1278279 - 1279187 | 33608.9 |
| nucleoside deaminase | RPYSC3_RS06050 | Not Available | Negative | 1279171 - 1279617 | 15810.0 |
| pseudouridine synthase | RPYSC3_RS06055 | Not Available | Positive | 1279784 - 1281964 | 81906.7 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | RPYSC3_RS06060 | Not Available | Positive | 1282151 - 1282714 | 20144.1 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | RPYSC3_RS06065 | Not Available | Negative | 1282849 - 1283874 | 36641.8 |
| molybdenum cofactor biosynthesis protein moae | RPYSC3_RS06070 | Not Available | Negative | 1283874 - 1284341 | 17122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
