Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | RPYSC3_RS05975 | Not Available | Negative | 1263966 - 1264943 | 34761.4 |
| atp phosphoribosyltransferase regulatory subunit | RPYSC3_RS05980 | Not Available | Negative | 1264940 - 1266088 | 40233.2 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | RPYSC3_RS05985 | Not Available | Negative | 1266231 - 1266986 | 27144.7 |
| hypothetical protein | RPYSC3_RS05990 | Not Available | Positive | 1267178 - 1267891 | 23965.4 |
| 4-hydroxybenzoate octaprenyltransferase | RPYSC3_RS05995 | Not Available | Positive | 1267888 - 1268838 | 34205.2 |
| duf6101 family protein | RPYSC3_RS06000 | Not Available | Negative | 1268875 - 1269399 | 19960.4 |
| tldd/pmba family protein | RPYSC3_RS06005 | Not Available | Positive | 1269698 - 1271095 | 48572.3 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | RPYSC3_RS06010 | Not Available | Positive | 1271082 - 1271897 | 29120.4 |
| duf4170 domain-containing protein | RPYSC3_RS06015 | Not Available | Positive | 1271935 - 1272183 | 9386.08 |
| 3-deoxy-d-manno-octulosonic acid transferase | RPYSC3_RS06020 | Not Available | Positive | 1272253 - 1273557 | 46948.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
