Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS05925 | Not Available | Negative | 1253539 - 1254732 | 42044.5 |
| chaperonin groel | RPYSC3_RS05930 | Not Available | Negative | 1254947 - 1256590 | 57588.0 |
| co-chaperone groes | RPYSC3_RS05935 | Not Available | Negative | 1256630 - 1256926 | 10625.0 |
| hypothetical protein | RPYSC3_RS05940 | Not Available | Positive | 1257224 - 1257739 | 17903.5 |
| mfs transporter | RPYSC3_RS05945 | Not Available | Positive | 1257781 - 1258989 | 41636.1 |
| protein phosphatase chez | RPYSC3_RS05950 | Not Available | Negative | 1259005 - 1259796 | 28589.9 |
| l,d-transpeptidase | RPYSC3_RS05955 | Not Available | Positive | 1260097 - 1260885 | 28901.4 |
| duf2076 domain-containing protein | RPYSC3_RS05960 | Not Available | Negative | 1260969 - 1261823 | 28980.0 |
| chbg/hpnk family deacetylase | RPYSC3_RS05965 | Not Available | Negative | 1261940 - 1262833 | 32353.9 |
| glycosyltransferase family 2 protein | RPYSC3_RS05970 | Not Available | Negative | 1262830 - 1263873 | 37348.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
