Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body rod protein flgc | RPYSC3_RS00500 | Not Available | Positive | 108732 - 109142 | 13745.1 |
| abc transporter atp-binding protein | RPYSC3_RS00505 | Not Available | Negative | 109254 - 110312 | 38839.9 |
| abc transporter atp-binding protein | RPYSC3_RS00510 | Not Available | Negative | 110309 - 111307 | 35655.5 |
| abc transporter permease | RPYSC3_RS00515 | Not Available | Negative | 111310 - 112218 | 31425.2 |
| abc transporter permease | RPYSC3_RS00520 | Not Available | Negative | 112215 - 113195 | 35081.1 |
| abc transporter substrate-binding protein | RPYSC3_RS00525 | Not Available | Negative | 113223 - 114824 | 58468.2 |
| cobw family gtp-binding protein | RPYSC3_RS00530 | Not Available | Negative | 114914 - 115870 | 33254.9 |
| amidohydrolase | RPYSC3_RS00535 | Not Available | Negative | 115867 - 117510 | 59059.7 |
| plp-dependent aminotransferase family protein | RPYSC3_RS00540 | Not Available | Positive | 117749 - 119290 | 56155.9 |
| sulfite exporter taue/safe family protein | RPYSC3_RS00545 | Not Available | Negative | 119396 - 120184 | 26840.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
