Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | RPYSC3_RS05715 | Not Available | Positive | 1211638 - 1212162 | 18284.5 |
| holliday junction branch migration protein ruva | RPYSC3_RS05720 | Not Available | Positive | 1212557 - 1213174 | 21582.0 |
| cytidine deaminase | RPYSC3_RS05725 | Not Available | Positive | 1213171 - 1213596 | 15429.5 |
| holliday junction branch migration dna helicase ruvb | RPYSC3_RS05730 | Not Available | Positive | 1213776 - 1214825 | 37795.3 |
| tol-pal system-associated acyl-coa thioesterase | RPYSC3_RS05735 | Not Available | Positive | 1214834 - 1215298 | 17301.0 |
| nad(p)/fad-dependent oxidoreductase | RPYSC3_RS05740 | Not Available | Positive | 1215398 - 1216708 | 47563.3 |
| opgc domain-containing protein | RPYSC3_RS05745 | Not Available | Positive | 1216820 - 1218064 | 46765.6 |
| duf1348 family protein | RPYSC3_RS05750 | Not Available | Positive | 1218122 - 1218589 | 18365.3 |
| tetr/acrr family transcriptional regulator | RPYSC3_RS05755 | Not Available | Positive | 1218608 - 1219156 | 19615.6 |
| ycii family protein | RPYSC3_RS05760 | Not Available | Positive | 1219306 - 1219677 | 13358.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
