Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS05665 | Not Available | Positive | 1202936 - 1203196 | 9519.88 |
| crp/fnr family transcriptional regulator | RPYSC3_RS05670 | Not Available | Positive | 1203347 - 1204021 | 23914.0 |
| duf2892 domain-containing protein | RPYSC3_RS05675 | Not Available | Positive | 1204137 - 1204325 | 6554.36 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS05680 | Not Available | Positive | 1204401 - 1204772 | 12945.7 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | RPYSC3_RS05685 | Not Available | Positive | 1204906 - 1205985 | 38730.3 |
| acyl-coa dehydrogenase | RPYSC3_RS05690 | Not Available | Positive | 1206046 - 1207260 | 44575.6 |
| mbl fold metallo-hydrolase | RPYSC3_RS05695 | Not Available | Positive | 1207450 - 1208382 | 33628.7 |
| methyl-accepting chemotaxis protein | RPYSC3_RS05700 | Not Available | Negative | 1208396 - 1210147 | 62645.8 |
| yebc/pmpr family dna-binding transcriptional regulator | RPYSC3_RS05705 | Not Available | Positive | 1210344 - 1211090 | 26944.5 |
| hypothetical protein | RPYSC3_RS05710 | Not Available | Negative | 1211136 - 1211441 | 10820.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
