Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sos response-associated peptidase | RPYSC3_RS05615 | Not Available | Positive | 1194597 - 1195370 | 28242.7 |
| hypothetical protein | RPYSC3_RS05620 | Not Available | Positive | 1195396 - 1195626 | 8666.06 |
| type ii toxin-antitoxin system rele/pare family toxin | RPYSC3_RS05625 | Not Available | Positive | 1195623 - 1195919 | 11375.7 |
| fad-binding oxidoreductase | RPYSC3_RS05630 | Not Available | Negative | 1195922 - 1197349 | 50827.2 |
| l-threonylcarbamoyladenylate synthase | RPYSC3_RS05635 | Not Available | Negative | 1197469 - 1198467 | 34140.3 |
| helix-turn-helix domain-containing protein | RPYSC3_RS05640 | Not Available | Positive | 1198701 - 1199603 | 32802.4 |
| mfs transporter | RPYSC3_RS05645 | Not Available | Positive | 1199729 - 1201015 | 45900.3 |
| amidohydrolase family protein | RPYSC3_RS05650 | Not Available | Positive | 1201008 - 1201910 | 32764.4 |
| Trna-pro | Not Available | Not Available | Positive | 1202033 - 1202109 | Not Available |
| hypothetical protein | RPYSC3_RS05660 | Not Available | Positive | 1202314 - 1202850 | 19629.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
