Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna1(val) (adenine(37)-n6)-methyltransferase | RPYSC3_RS05465 | Not Available | Positive | 1161551 - 1162330 | 26497.0 |
| s49 family peptidase | RPYSC3_RS05470 | Not Available | Positive | 1162576 - 1163478 | 31756.7 |
| duf4234 domain-containing protein | RPYSC3_RS05475 | Not Available | Positive | 1163597 - 1163785 | 6675.23 |
| glycine--trna ligase subunit alpha | RPYSC3_RS05480 | Not Available | Positive | 1164207 - 1165154 | 35658.2 |
| endonuclease domain-containing protein | RPYSC3_RS05490 | Not Available | Positive | 1165353 - 1165787 | 16255.2 |
| glycine--trna ligase subunit beta | RPYSC3_RS05495 | Not Available | Positive | 1165787 - 1167925 | 78196.0 |
| hypothetical protein | RPYSC3_RS05500 | Not Available | Positive | 1168584 - 1169690 | 38293.3 |
| mgtc/sapb family protein | RPYSC3_RS05505 | Not Available | Negative | 1169701 - 1170987 | 45387.2 |
| duf3096 domain-containing protein | RPYSC3_RS05510 | Not Available | Positive | 1171457 - 1171612 | 5467.34 |
| pyruvate, phosphate dikinase | RPYSC3_RS05515 | Not Available | Positive | 1171704 - 1174730 | 108591.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
