Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric reductase-like transmembrane domain-containing protein | RPYSC3_RS05415 | Not Available | Negative | 1151755 - 1153017 | 44908.3 |
| hypothetical protein | RPYSC3_RS05420 | Not Available | Negative | 1153022 - 1153333 | 11708.0 |
| dsba family protein | RPYSC3_RS05425 | Not Available | Negative | 1153542 - 1154195 | 23204.1 |
| efflux rnd transporter permease subunit | RPYSC3_RS05430 | Not Available | Negative | 1154257 - 1157481 | 115872.0 |
| efflux rnd transporter periplasmic adaptor subunit | RPYSC3_RS05435 | Not Available | Negative | 1157478 - 1158473 | 35833.0 |
| arsr/smtb family transcription factor | RPYSC3_RS05440 | Not Available | Negative | 1158475 - 1158816 | 12419.0 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS25240 | Not Available | Positive | 1158897 - 1159007 | 3951.94 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS05450 | Not Available | Negative | 1159000 - 1159803 | 28804.7 |
| polyprenyl synthetase family protein | RPYSC3_RS05455 | Not Available | Negative | 1160112 - 1161122 | 36210.7 |
| duf2007 domain-containing protein | RPYSC3_RS05460 | Not Available | Positive | 1161331 - 1161558 | 8067.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
