Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | RPYSC3_RS00450 | Not Available | Positive | 99068 - 99943 | 32291.8 |
| hypothetical protein | RPYSC3_RS00455 | Not Available | Negative | 100202 - 100726 | 20086.6 |
| peptidoglycan-binding protein | RPYSC3_RS00460 | Not Available | Negative | 100828 - 102171 | 46398.5 |
| hesa/moeb/thif family protein | RPYSC3_RS00465 | Not Available | Positive | 102380 - 103180 | 28068.0 |
| mfs transporter | RPYSC3_RS00470 | Not Available | Positive | 103305 - 104993 | 59282.0 |
| hypothetical protein | RPYSC3_RS00475 | Not Available | Negative | 105130 - 105348 | 7689.5 |
| phasin family protein | RPYSC3_RS00480 | Not Available | Negative | 105482 - 105823 | 12692.2 |
| hypothetical protein | RPYSC3_RS00485 | Not Available | Negative | 106062 - 106466 | 15299.1 |
| hypothetical protein | RPYSC3_RS00490 | Not Available | Negative | 106545 - 106886 | 11271.5 |
| pepsy-associated tm helix domain-containing protein | RPYSC3_RS00495 | Not Available | Positive | 107700 - 108596 | 32448.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
