Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pa0069 family radical sam protein | RPYSC3_RS05370 | Not Available | Negative | 1143112 - 1144272 | 43014.9 |
| glycosyl transferase | RPYSC3_RS05375 | Not Available | Positive | 1144453 - 1145019 | 19570.3 |
| helix-turn-helix domain-containing gnat family n-acetyltransferase | RPYSC3_RS05380 | Not Available | Positive | 1145177 - 1146118 | 34275.9 |
| hypothetical protein | RPYSC3_RS24930 | Not Available | Positive | 1146118 - 1146264 | 5501.99 |
| coa-transferase | RPYSC3_RS05385 | Not Available | Negative | 1146278 - 1147030 | 27030.1 |
| coa transferase subunit a | RPYSC3_RS05390 | Not Available | Negative | 1147027 - 1147845 | 28391.3 |
| molybdenum cofactor biosynthesis protein b | RPYSC3_RS05395 | Not Available | Negative | 1147957 - 1148505 | 19851.7 |
| neutral zinc metallopeptidase | RPYSC3_RS05400 | Not Available | Negative | 1148641 - 1149561 | 33066.1 |
| site-specific dna-methyltransferase | RPYSC3_RS05405 | Not Available | Positive | 1149942 - 1151072 | 42029.4 |
| cytochrome b5 domain-containing protein | RPYSC3_RS05410 | Not Available | Negative | 1151393 - 1151758 | 13255.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
