Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | RPYSC3_RS05315 | Not Available | Positive | 1132409 - 1132999 | 21219.7 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | RPYSC3_RS05320 | Not Available | Positive | 1133088 - 1133621 | 19289.8 |
| nifb/nifx family molybdenum-iron cluster-binding protein | RPYSC3_RS05325 | Not Available | Positive | 1133869 - 1134261 | 13795.3 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS25235 | Not Available | Negative | 1134433 - 1134525 | 3143.88 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | RPYSC3_RS05340 | Not Available | Negative | 1134749 - 1135648 | 30468.7 |
| tetratricopeptide repeat protein | RPYSC3_RS05345 | Not Available | Negative | 1135754 - 1137535 | 65548.1 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | RPYSC3_RS05350 | Not Available | Negative | 1137791 - 1139449 | 60013.3 |
| uracil-dna glycosylase | RPYSC3_RS05355 | Not Available | Positive | 1139651 - 1140481 | 29849.1 |
| glycosyltransferase family 39 protein | RPYSC3_RS05360 | Not Available | Negative | 1140540 - 1142048 | 53984.4 |
| ribonuclease hii | RPYSC3_RS05365 | Not Available | Negative | 1142120 - 1143016 | 31659.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
