Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hype | RPYSC3_RS05105 | Not Available | Positive | 1090142 - 1091188 | 36364.8 |
| sigma-54-dependent transcriptional regulator | RPYSC3_RS05110 | Not Available | Positive | 1091229 - 1092677 | 53723.8 |
| sensor histidine kinase | RPYSC3_RS05115 | Not Available | Positive | 1092667 - 1094019 | 49173.7 |
| pas domain s-box protein | RPYSC3_RS05120 | Not Available | Positive | 1094128 - 1096515 | 87756.0 |
| iclr family transcriptional regulator | RPYSC3_RS05125 | Not Available | Negative | 1096538 - 1097329 | 28221.2 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | RPYSC3_RS05130 | Not Available | Positive | 1097689 - 1099047 | 50803.4 |
| glutamine synthetase family protein | RPYSC3_RS05135 | Not Available | Positive | 1099079 - 1100509 | 53452.9 |
| abc transporter substrate-binding protein | RPYSC3_RS05140 | Not Available | Positive | 1100556 - 1101728 | 41639.2 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS05145 | Not Available | Positive | 1101939 - 1102805 | 30821.9 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS05150 | Not Available | Positive | 1102807 - 1103805 | 34606.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
