Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase accessory protein | RPYSC3_RS05055 | Not Available | Positive | 1082112 - 1082513 | 13936.8 |
| hydrogenase expression/formation protein | RPYSC3_RS05060 | Not Available | Positive | 1082510 - 1083376 | 30725.6 |
| rubredoxin | RPYSC3_RS05065 | Not Available | Positive | 1083373 - 1083585 | 7690.83 |
| [nife]-hydrogenase assembly chaperone hybe | RPYSC3_RS05070 | Not Available | Positive | 1083575 - 1084102 | 18139.6 |
| nickel-dependent hydrogenase large subunit | RPYSC3_RS05075 | Not Available | Positive | 1084099 - 1085208 | 38607.8 |
| hydrogenase maturation nickel metallochaperone hypa | RPYSC3_RS05080 | Not Available | Positive | 1085201 - 1085542 | 12534.1 |
| hydrogenase nickel incorporation protein hypb | RPYSC3_RS05085 | Not Available | Positive | 1085542 - 1086495 | 33804.4 |
| carbamoyltransferase hypf | RPYSC3_RS05090 | Not Available | Positive | 1086500 - 1088773 | 80504.6 |
| hypc/hybg/hupf family hydrogenase formation chaperone | RPYSC3_RS05095 | Not Available | Positive | 1088773 - 1089006 | 8078.88 |
| hydrogenase formation protein hypd | RPYSC3_RS05100 | Not Available | Positive | 1089003 - 1090145 | 41232.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
