Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | RPYSC3_RS05005 | Not Available | Negative | 1071698 - 1073479 | 62030.1 |
| Trna-gln | Not Available | Not Available | Positive | 1073696 - 1073770 | Not Available |
| hupu protein | RPYSC3_RS05015 | Not Available | Positive | 1073901 - 1074902 | 34298.8 |
| nickel-dependent hydrogenase large subunit | RPYSC3_RS05020 | Not Available | Positive | 1074899 - 1076344 | 51748.9 |
| hydrogenase small subunit | RPYSC3_RS05025 | Not Available | Positive | 1076580 - 1077692 | 40277.3 |
| nickel-dependent hydrogenase large subunit | RPYSC3_RS05030 | Not Available | Positive | 1077711 - 1079504 | 65675.4 |
| ni/fe-hydrogenase, b-type cytochrome subunit | RPYSC3_RS05035 | Not Available | Positive | 1079521 - 1080249 | 27874.3 |
| hyad/hybd family hydrogenase maturation endopeptidase | RPYSC3_RS05040 | Not Available | Positive | 1080377 - 1080961 | 20844.9 |
| hupe/urej family protein | RPYSC3_RS05045 | Not Available | Positive | 1080975 - 1081568 | 19336.3 |
| hypc/hybg/hupf family hydrogenase formation chaperone | RPYSC3_RS05050 | Not Available | Positive | 1081589 - 1081891 | 11007.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
